GL1X · GenesisL1 explorer

MolNFT v1 · #50499 · protein

DHFR R67 complexed with NADP and dihydrofolate

2RK1 · Dihydrofolate reductase type 2: “DHFR R67 complexed with NADP and dihydrofolate”. X-ray diffraction, 2 ligands (DHF, NAP). MolNFT v1 #50499 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2RK1
Type
protein
Length
58 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Dihydrofolate reductase type 2
EC
1.5.1.3
UniProt
P00383
Ligands
DHF, NAP

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 45% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ADihydrofolate reductase type 2 (EC 1.5.1.3)protein585% helix, 45% strandP00383

Ligands and binding sites

  • DHF · Dihydrofolic acid · ligand
  • NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · chains A
  • MRD · (4R)-2-methylpentane-2,4-diol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2RK1 · DHFR R67 Complexed with NADP and dihydrofolate · the same entry in another collection · chain A against A, TM-score 1.00
  • P00383 · AlphaFold monomer V2.0 prediction for dihydrofolate reductase type 2 (P00383) · a predicted model of the same protein · chain A against A, TM-score 0.99

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