MolNFT v1 · #49681 · protein

Crystal structure of N-cadherin domains EC12

2QVI · Cadherin-2: “Crystal structure of N-cadherin domains EC12”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #49681 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2QVI
Type: protein
Length: 215 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cadherin-2
UniProt: P15116
Ligands: CA

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cadherin-2	protein	215	2% helix, 38% strand	P15116

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

2QVI · Crystal structure of N-cadherin domains EC12 · the same entry in another collection · chain A against A, TM-score 1.00
P15116 · AlphaFold monomer V2.0 prediction for cadherin-2 (P15116) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P15116
Elsewhere: RCSB PDB 2QVI · PDBe 2QVI · UniProt P15116

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