MolNFT v1 · #47943 · protein
Solution structure of the syntrophin PDZ domain in complex with the peptide gvkeslv, NMR, 15 structures
2PDZ: “Solution structure of the syntrophin PDZ domain in complex with the peptide gvkeslv, NMR, 15 structures”. Solution nmr. MolNFT v1 #47943 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2PDZ
- Type
- protein
- Length
- 91 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Syntrophin; Peptide gvkeslv
- UniProt
- Q61234
Structure
solution nmr · 2 distinct chains · 21% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Syntrophin | protein | 86 | 22% helix, 38% strand | Q61234 |
| B | Peptide gvkeslv | protein | 5 | 0% helix, 20% strand | — |
Interfaces
1 interface between chains.
- A–B · 433 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 2PDZ · Solution structure of the syntrophin PDZ domain in complex with the peptide gvkeslv, NMR… · the same entry in another collection · chain A against A, TM-score 1.00
- Q61234 · AlphaFold monomer V2.0 prediction for alpha-1-syntrophin (Q61234) · a predicted model of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q61234
- Elsewhere: RCSB PDB 2PDZ · PDBe 2PDZ · UniProt Q61234
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