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MolNFT v1 · #45637 · protein

Holo form of calmodulin-like domain of human non-muscle alpha-actinin 1

2N8Y · Alpha-actinin-1: “Holo form of calmodulin-like domain of human non-muscle alpha-actinin 1”. Solution nmr, 1 ligand (CA), 1 pocket (best druggability 0.54). MolNFT v1 #45637 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
2N8Y
Type
protein
Length
153 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Alpha-actinin-1
UniProt
P12814
Ligands
CA
Pockets
1 · best druggability 0.54

Structure

solution nmr · 1 distinct chain · 46% helix, 7% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AAlpha-actinin-1protein15346% helix, 7% strandP12814

Ligands and binding sites

  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11840.540.7929empty

Compared structures

  • 2N8Y · Holo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1 · the same entry in another collection · chain A against A, TM-score 1.00
  • P12814 · AlphaFold monomer V2.0 prediction for alpha-actinin-1 (P12814) · a predicted model of the same protein · chain A against A, TM-score 0.43

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