MolNFT v1 · #42608 · protein

Fusion construct of CR17 from lrp-1 and apoe residues 130-149

2KNY · Lrp-1, linker, apo-E: “Fusion construct of CR17 from lrp-1 and apoe residues 130-149”. Solution nmr, 1 ligand (CA). MolNFT v1 #42608 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2KNY
Type: protein
Length: 80 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lrp-1, linker, apo-E
UniProt: Q07954, P02649
Ligands: CA

Structure

solution nmr · 1 distinct chain · 19% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lrp-1, linker, apo-E	protein	80	19% helix, 8% strand	Q07954, P02649

Ligands and binding sites

CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

2KNY · Fusion construct of CR17 from LRP-1 and ApoE residues 130-149 · the same entry in another collection · chain A against A, TM-score 1.00
P02649 · AlphaFold monomer V2.0 prediction for apolipoprotein E (P02649) · a predicted model of the same protein · chain A against A, TM-score 0.36

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q07954
Every structure of UniProt P02649
Elsewhere: RCSB PDB 2KNY · PDBe 2KNY · UniProt Q07954 · UniProt P02649

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