MolNFT v1 · #3843 · protein

Crystal structure of the xlp protein sap in complex with a slam peptide

1D4T · T cell signal transduction molecule sap: “Crystal structure of the xlp protein sap in complex with a slam peptide”. X-ray diffraction. MolNFT v1 #3843 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1D4T
Type: protein
Length: 115 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: T cell signal transduction molecule sap; Signaling lymphocytic activation molecule
UniProt: O60880, Q13291

Structure

x-ray diffraction · 2 distinct chains · 17% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	T cell signal transduction molecule sap	protein	104	18% helix, 29% strand	O60880
B	Signaling lymphocytic activation molecule	protein	11	0% helix, 45% strand	Q13291

Interfaces

1 interface between chains.

A–B · 864 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

1D4T · Crystal structure of the xlp protein sap in complex with a slam peptide · the same entry in another collection · chain A against A, TM-score 1.00
O60880 · AlphaFold monomer V2.0 prediction for SH2 domain-containing protein 1A (O60880) · a predicted model of the same protein · chain A against A, TM-score 0.97
Q13291 · AlphaFold monomer V2.0 prediction for signaling lymphocytic activation molecule (Q13291) · a predicted model of the same protein · chain B against A, TM-score 0.43

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O60880
Every structure of UniProt Q13291
Elsewhere: RCSB PDB 1D4T · PDBe 1D4T · UniProt O60880 · UniProt Q13291

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