MolNFT v1 · #34269 · protein

Solution structure of the rwd domain of human ring finger protein 25

2DAY: “Solution structure of the rwd domain of human ring finger protein 25”. Solution nmr, 1 pocket (best druggability 0.32). MolNFT v1 #34269 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2DAY
Type: protein
Length: 128 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ring finger protein 25
EC: 6.3.2.-
UniProt: Q96BH1
Pockets: 1 · best druggability 0.32

Structure

solution nmr · 1 distinct chain · 32% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ring finger protein 25 (EC 6.3.2.-)	protein	128	32% helix, 21% strand	Q96BH1

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	66	0.32	0.75	17	empty

Compared structures

2DAY · Solution structure of the RWD domain of human ring finger protein 25 · the same entry in another collection · chain A against A, TM-score 1.00
Q96BH1 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase RNF25 (Q96BH1) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96BH1
Elsewhere: RCSB PDB 2DAY · PDBe 2DAY · UniProt Q96BH1

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