MolNFT v1 · #27939 · protein
Poliovirus 135S cell entry intermediate
1XYR · Genome polyprotein, coat protein VP1: “Poliovirus 135S cell entry intermediate”. Electron microscopy. MolNFT v1 #27939 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1XYR
- Type
- protein
- Length
- 724 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Genome polyprotein, coat protein VP1; Genome polyprotein, coat protein VP2; Genome…
- UniProt
- P03300
Structure
electron microscopy · 7 distinct chains · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| 1 | Genome polyprotein, coat protein VP1 | protein | 232 | 0% helix, 0% strand | P03300 |
| 2 | Genome polyprotein, coat protein VP2 | protein | 237 | 0% helix, 0% strand | P03300 |
| 3 | Genome polyprotein, coat protein VP3 | protein | 182 | 0% helix, 0% strand | P03300 |
| 5 | Genome polyprotein, coat protein VP3 | protein | 12 | 0% helix, 0% strand | P03300 |
| 6 | Genome polyprotein, coat protein VP3 | protein | 36 | 0% helix, 0% strand | P03300 |
| 7 | Genome polyprotein, coat protein VP2 | protein | 14 | 0% helix, 0% strand | P03300 |
| 8 | Genome polyprotein, coat protein VP1 | protein | 11 | 0% helix, 0% strand | P03300 |
Interfaces
8 interfaces between chains.
- 1–6 · 231 Ų buried · 0 hydrogen bonds · protein-protein
- 1–3 · 187 Ų buried · 0 hydrogen bonds · protein-protein
- 2–3 · 181 Ų buried · 0 hydrogen bonds · protein-protein
- 1–2 · 178 Ų buried · 0 hydrogen bonds · protein-protein
- 3–6 · 106 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 1XYR · Poliovirus 135S cell entry intermediate · the same entry in another collection · chain 1 against 1, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03300
- Elsewhere: RCSB PDB 1XYR · PDBe 1XYR · UniProt P03300
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