MolNFT v1 · #2509 · protein
Solution structure of the calcium-bound first C2-domain of synaptotagmin I
1BYN · Protein (synaptotagmin I): “Solution structure of the calcium-bound first C2-domain of synaptotagmin I”. Solution nmr, 1 ligand (CA). MolNFT v1 #2509 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1BYN
- Type
- protein
- Length
- 128 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (synaptotagmin I)
- UniProt
- P21707
- Ligands
- CA
Structure
solution nmr · 1 distinct chain · 5% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (synaptotagmin I) | protein | 128 | 5% helix, 48% strand | P21707 |
Ligands and binding sites
- CA · Calcium ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1BYN · Solution structure of the calcium-bound first C2-domain of synaptotagmin I · the same entry in another collection · chain A against A, TM-score 1.00
- P21707 · AlphaFold monomer V2.0 prediction for synaptotagmin-1 (P21707) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P21707
- Elsewhere: RCSB PDB 1BYN · PDBe 1BYN · UniProt P21707
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