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MolNFT v1 · #23785 · protein

Crystal structure of rice alpha-galactosidase

1UAS: “Crystal structure of rice alpha-galactosidase”. X-ray diffraction, 3 ligands (GLA, PT, SO4). MolNFT v1 #23785 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1UAS
Type
protein
Length
362 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Alpha-galactosidase
EC
3.2.1.22
UniProt
Q9FXT4
Ligands
GLA, PT, SO4

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AAlpha-galactosidase (EC 3.2.1.22)protein36230% helix, 25% strandQ9FXT4

Ligands and binding sites

  • GLA · alpha-D-galactopyranose · sugar · chains A
  • PT · Platinum (II) ion · metal · chains A
  • SO4 · Sulfate ion · ion · chains A
  • GOL · Glycerol · additive · 7 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

  • 1UAS · Crystal structure of rice alpha-galactosidase · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9FXT4 · AlphaFold monomer V2.0 prediction for alpha-galactosidase (Q9FXT4) · a predicted model of the same protein · chain A against A, TM-score 1.00

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