MolNFT v1 · #21081 · protein
Structure of a possible uridine kinase from bacillus stearothermophilus
1RZ3 · Hypothetical protein RBSTP0775: “Structure of a possible uridine kinase from bacillus stearothermophilus”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.31). MolNFT v1 #21081 on GenesisL1: 3D structure, binding…
- PDB
- 1RZ3
- Type
- protein
- Length
- 184 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein RBSTP0775
- UniProt
- P84134
- Ligands
- CA
- Pockets
- 1 · best druggability 0.31
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein RBSTP0775 | protein | 184 | 43% helix, 23% strand | P84134 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 74 | 0.31 | 0.74 | 20 | empty |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 1RZ3 · Structure of a Possible Uridine Kinase from Bacillus stearothermophilus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P84134
- Elsewhere: RCSB PDB 1RZ3 · PDBe 1RZ3 · UniProt P84134
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