MolNFT v1 · #191219 · protein
Local refinement of rh trimer, glycophorin B and BAND3-III transmembrane region, class 1A of erythrocyte ankyrin-1 complex
8CRT: “Local refinement of rh trimer, glycophorin B and BAND3-III transmembrane region, class 1A of erythrocyte…”. Electron microscopy, 2 ligands (CLR, NAG). MolNFT v1 #191219 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8CRT
- Type
- protein
- Length
- 2,305 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P18577, Q02094, P06028, P02724, P02730
- Ligands
- CLR, NAG
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| K | — | protein | 380 | — | P18577 |
| L | — | protein | 388 | — | Q02094 |
| Q | — | protein | 390 | — | Q02094 |
| P | — | protein | 33 | — | P06028 |
| B, D | — | protein | 40 | — | P02724 |
| C, E | — | protein | 517 | — | P02730 |
Ligands and binding sites
- CLR · Cholesterol · ligand · 2 copies · chains B, C, D, E
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains C, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 8CRT · Local refinement of Rh trimer, glycophorin B and Band3-III transmembrane region, class 1a… · the same entry in another collection · chain E against E, TM-score 1.00
- Q02094 · AlphaFold monomer V2.0 prediction for ammonium transporter rh type a (Q02094) · a predicted model of the same protein · chain L against A, TM-score 0.99
- P02730 · AlphaFold monomer V2.0 prediction for band 3 anion transport protein (P02730) · a predicted model of the same protein · chain C against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18577
- Every structure of UniProt Q02094
- Every structure of UniProt P06028
- Every structure of UniProt P02724
- Every structure of UniProt P02730
- Elsewhere: RCSB PDB 8CRT · PDBe 8CRT · UniProt P18577 · UniProt Q02094 · UniProt P06028 · UniProt P02724 · UniProt P02730
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