GL1X · GenesisL1 explorer

MolNFT v1 · #191128 · protein

Insulin regulated aminopeptidase (irap) in complex with a nanomolar alpha hydroxy beta amino acid based inhibitor.

7ZYF: “Insulin regulated aminopeptidase (irap) in complex with a nanomolar alpha hydroxy beta amino acid based…”. X-ray diffraction, 5 ligands (KFR, NAG, BMA). MolNFT v1 #191128 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7ZYF
Type
protein
Length
1,706 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9UIQ6
Ligands
KFR, NAG, BMA, MAN, ZN

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein852—Q9UIQ6
B—protein854—Q9UIQ6

Ligands and binding sites

  • KFR · methyl (2S)-2-[[(2S)-2-[[(2S,3R)-3-azanyl-2-oxidanyl-4-(4-oxidanylphenoxy)butanoyl]amino]-4-methyl-pentanoyl]amino]-3-(1H-indol-3-yl)propanoate · ligand · 2 copies · chains A, B
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 29 copies · chains A, B
  • BMA · beta-D-mannopyranose · sugar · 5 copies
  • MAN · alpha-D-mannopyranose · sugar · 5 copies · chains A, B
  • ZN · Zinc ion · metal · 2 copies · chains A, B
  • EDO · 1,2-ethanediol · additive · 7 copies · chains A, B
  • PEG · Di(hydroxyethyl)ether · additive · 3 copies · chains A
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7ZYF · Insulin regulated aminopeptidase (IRAP) in complex with a nanomolar alpha hydroxy beta… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9UIQ6 · AlphaFold monomer V2.0 prediction for leucyl-cystinyl aminopeptidase (Q9UIQ6) · a predicted model of the same protein · chain A against A, TM-score 1.00

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