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MolNFT v1 · #190406 · protein

Crystal structure of ME1 in complex with NADPH

7X12: “Crystal structure of ME1 in complex with NADPH”. X-ray diffraction, 2 ligands (NDP, MN). MolNFT v1 #190406 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7X12
Type
protein
Length
2,256 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P48163
Ligands
NDP, MN

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D—protein564—P48163

Ligands and binding sites

  • NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 4 copies · chains A, B, C, D
  • MN · Manganese (II) ion · metal · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7X12 · Crystal structure of ME1 in complex with NADPH · the same entry in another collection · chain A against A, TM-score 1.00
  • P48163 · AlphaFold monomer V2.0 prediction for NADP-dependent malic enzyme (P48163) · a predicted model of the same protein · chain A against A, TM-score 0.98

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