MolNFT v1 · #18990 · protein
Solution structure of T-cell surface glycoprotein CD4 and proto- oncogene tyrosine-protein kinase lck fragments
1Q68: “Solution structure of T-cell surface glycoprotein CD4 and proto- oncogene tyrosine-protein kinase lck…”. Solution nmr, 1 ligand (ZN). MolNFT v1 #18990 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1Q68
- Type
- protein
- Length
- 67 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- T-cell surface glycoprotein CD4; Proto-oncogene tyrosine-protein kinase lck
- UniProt
- P01730, P06239
- Ligands
- ZN
Structure
solution nmr · 2 distinct chains · 21% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | T-cell surface glycoprotein CD4 | protein | 38 | 26% helix, 0% strand | P01730 |
| B | Proto-oncogene tyrosine-protein kinase lck | protein | 29 | 14% helix, 0% strand | P06239 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 502 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 1Q68 · Solution structure of T-cell surface glycoprotein CD4 and Proto-oncogene tyrosine-protein… · the same entry in another collection · chain A against A, TM-score 1.00
- P01730 · AlphaFold monomer V2.0 prediction for T-cell surface glycoprotein CD4 (P01730) · a predicted model of the same protein · chain A against A, TM-score 0.37
- P06239 · AlphaFold monomer V2.0 prediction for tyrosine-protein kinase lck (P06239) · a predicted model of the same protein · chain B against A, TM-score 0.34
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01730
- Every structure of UniProt P06239
- Elsewhere: RCSB PDB 1Q68 · PDBe 1Q68 · UniProt P01730 · UniProt P06239
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