MolNFT v1 · #189616 · protein
Structure of human KCNQ4-ML213 complex with PIP2
7VNP: “Structure of human KCNQ4-ML213 complex with PIP2”. Electron microscopy, 3 ligands (PT5, 7YV, K). MolNFT v1 #189616 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7VNP
- Type
- protein
- Length
- 1,904 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P56696, A0A140NCD0, P0DP25
- Ligands
- PT5, 7YV, K
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G | — | protein | 332 | — | P56696, A0A140NCD0 |
| B, D, F, H | — | protein | 144 | — | P0DP25 |
Ligands and binding sites
- PT5 · (1S)-2-{[(R)-hydroxy{[(1r,2r,3s,4r,5r,6s)-2,3,6-trihydroxy-4,5-bis(phosphonooxy) cyclohexyl]oxy}phosphoryl]oxy}-1-[(octadecanoyloxy) methyl]ethyl (8E,11E)-icosa-5,8,11,14-tetraenoate · ligand · 8 copies · chains A, C, E, G
- 7YV · (1S,2S,4R)-N-(2,4,6-trimethylphenyl) bicyclo[2.2.1]heptane-2-carboxamid · ligand · 4 copies · chains A, C, G, E
- K · Potassium ion · metal · 4 copies · chains A, C, E, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7VNP · Structure of human KCNQ4-ML213 complex with PIP2 · the same entry in another collection · chain H against H, TM-score 1.00
- P56696 · AlphaFold monomer V2.0 prediction for potassium voltage-gated channel subfamily kqt… · a predicted model of the same protein · chain A against A, TM-score 0.78
- P0DP25 · AlphaFold monomer V2.0 prediction for calmodulin-3 (P0DP25) · a predicted model of the same protein · chain H against A, TM-score 0.43
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56696
- Every structure of UniProt A0A140NCD0
- Every structure of UniProt P0DP25
- Elsewhere: RCSB PDB 7VNP · PDBe 7VNP · UniProt P56696 · UniProt A0A140NCD0 · UniProt P0DP25
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