MolNFT v1 · #188701 · protein + DNA
Human DNA polymerase eta-DNA ternary mismatch COMPLEX:REACTION with 0.5 mm MN2+ for 1800S then with 10 mm MN2+ for 300S
7U76: “Human DNA polymerase eta-DNA ternary mismatch COMPLEX:REACTION with 0.5 mm MN2+ for 1800S then with 10 mm…”. X-ray diffraction, 3 ligands (DPO, DGT, MN). MolNFT v1 #188701 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7U76
- Type
- protein + DNA
- Length
- 450 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Y253
- Ligands
- DPO, DGT, MN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 430 | — | Q9Y253 |
| T | — | dna | 11 | — | — |
| P | — | dna | 9 | — | — |
Ligands and binding sites
- DPO · Diphosphate · ligand · chains A, P
- DGT · 2'-deoxyguanosine-5'-triphosphate · ligand · chains A, T, P
- MN · Manganese (II) ion · metal · 3 copies · chains A, P
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7U76 · Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 0.5 mM Mn2+ for 1800s… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y253
- Elsewhere: RCSB PDB 7U76 · PDBe 7U76 · UniProt Q9Y253
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