MolNFT v1 · #187210 · protein
Crystal structure of a guanylate kinase from stenotrophomonas maltophilia K279A with heterogeneous ligand states of GMP/ADP, gmp/-, GDP/-, and GMP/ATPGS
7S5E: “Crystal structure of a guanylate kinase from stenotrophomonas maltophilia K279A with heterogeneous ligand…”. X-ray diffraction, 4 ligands (5GP, ADP, GDP). MolNFT v1 #187210 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7S5E
- Type
- protein
- Length
- 1,612 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B2FT06
- Ligands
- 5GP, ADP, GDP, AGS
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 203 | — | B2FT06 |
| B, F | — | protein | 198 | — | B2FT06 |
| C, G | — | protein | 198 | — | B2FT06 |
| D, H | — | protein | 207 | — | B2FT06 |
Ligands and binding sites
- 5GP · Guanosine-5'-monophosphate · ligand · 6 copies · chains A, B, D, E, F, H
- ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains A, E
- GDP · Guanosine-5'-diphosphate · ligand · 2 copies · chains C, G
- AGS · Phosphothiophosphoric acid-adenylate ester · ligand · 2 copies · chains D, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7S5E · Crystal structure of a guanylate kinase from Stenotrophomonas maltophilia K279a with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2FT06
- Elsewhere: RCSB PDB 7S5E · PDBe 7S5E · UniProt B2FT06
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.