MolNFT v1 · #186525 · protein
Human retinal variant IMPDH1(546) treated with GTP, ATP, imp, NAD+; interface-centered
7RGQ: “Human retinal variant IMPDH1(546) treated with GTP, ATP, imp, NAD+; interface-centered”. Electron microscopy, 4 ligands (GTP, NAD, IMP). MolNFT v1 #186525 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RGQ
- Type
- protein
- Length
- 3,848 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P20839
- Ligands
- GTP, NAD, IMP, ATP
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H | — | protein | 481 | — | P20839 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · 16 copies · chains A, B, C, D, E, F, G, H
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- IMP · Inosinic acid · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- ATP · Adenosine-5'-triphosphate · ligand · 8 copies · chains A, H, B, G, C, F, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RGQ · Human retinal variant IMPDH1(546) treated with GTP, ATP, imp, NAD+; interface-centered · the same entry in another collection · chain H against H, TM-score 1.00
- P20839 · AlphaFold monomer V2.0 prediction for inosine-5'-monophosphate dehydrogenase 1 (P20839) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P20839
- Elsewhere: RCSB PDB 7RGQ · PDBe 7RGQ · UniProt P20839
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