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MolNFT v1 · #186399 · protein

Crystal structure of ADP-bound galactokinase

7RCL: “Crystal structure of ADP-bound galactokinase”. X-ray diffraction, 5 ligands (ADP, GLA, MG). MolNFT v1 #186399 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7RCL
Type
protein
Length
1,564 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P51570
Ligands
ADP, GLA, MG, NA, PO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D—protein391—P51570

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · 4 copies · chains A, B, C, D
  • GLA · alpha-D-galactopyranose · sugar · 4 copies · chains A, B, C, D
  • MG · Magnesium ion · metal · 4 copies · chains A, B, C, D
  • NA · Sodium ion · metal · 4 copies · chains A, B, C, D
  • PO4 · Phosphate ion · ion · 11 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7RCL · Crystal Structure of ADP-bound Galactokinase · the same entry in another collection · chain D against D, TM-score 1.00
  • P51570 · AlphaFold monomer V2.0 prediction for galactokinase (P51570) · a predicted model of the same protein · chain D against A, TM-score 1.00

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