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MolNFT v1 · #185582 · protein

Structure of hedgehog acyltransferase (hhat) in complex with megabody 177 bound to non-hydrolysable palmitoyl-CoA (composite MAP)

7Q1U: “Structure of hedgehog acyltransferase (hhat) in complex with megabody 177 bound to non-hydrolysable…”. Electron microscopy, 5 ligands (PLM, CLR, HEM). MolNFT v1 #185582 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7Q1U
Type
protein
Length
1,357 residues
Chains
2
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q5VTY9
Ligands
PLM, CLR, HEM, HD6, MG

Structure

electron microscopy · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein485—Q5VTY9
B—protein872——

Ligands and binding sites

  • PLM · Palmitic acid · ligand · 2 copies · chains A
  • CLR · Cholesterol · ligand · chains A
  • HEM · Protoporphyrin IX containing Fe · ligand · chains A
  • HD6 · [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{S})-4-[[3-(2-hexadecylsulfanylethylamino)-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7Q1U · Structure of Hedgehog acyltransferase (HHAT) in complex with megabody 177 bound to… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q5VTY9 · AlphaFold monomer V2.0 prediction for protein-cysteine N-palmitoyltransferase hhat… · a predicted model of the same protein · chain A against A, TM-score 0.99

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