MolNFT v1 · #185582 · protein
Structure of hedgehog acyltransferase (hhat) in complex with megabody 177 bound to non-hydrolysable palmitoyl-CoA (composite MAP)
7Q1U: “Structure of hedgehog acyltransferase (hhat) in complex with megabody 177 bound to non-hydrolysable…”. Electron microscopy, 5 ligands (PLM, CLR, HEM). MolNFT v1 #185582 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7Q1U
- Type
- protein
- Length
- 1,357 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5VTY9
- Ligands
- PLM, CLR, HEM, HD6, MG
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 485 | — | Q5VTY9 |
| B | — | protein | 872 | — | — |
Ligands and binding sites
- PLM · Palmitic acid · ligand · 2 copies · chains A
- CLR · Cholesterol · ligand · chains A
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
- HD6 · [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{S})-4-[[3-(2-hexadecylsulfanylethylamino)-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate · ligand · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7Q1U · Structure of Hedgehog acyltransferase (HHAT) in complex with megabody 177 bound to… · the same entry in another collection · chain A against A, TM-score 1.00
- Q5VTY9 · AlphaFold monomer V2.0 prediction for protein-cysteine N-palmitoyltransferase hhat… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5VTY9
- Elsewhere: RCSB PDB 7Q1U · PDBe 7Q1U · UniProt Q5VTY9
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