MolNFT v1 · #185535 · protein
Crystal structure of serine hydroxymethyltransferase, isoform 2 from arabidopsis thaliana (SHM2)
7PZZ: “Crystal structure of serine hydroxymethyltransferase, isoform 2 from arabidopsis thaliana (SHM2)”. X-ray diffraction, 2 ligands (CL, SO4). MolNFT v1 #185535 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PZZ
- Type
- protein
- Length
- 1,902 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q94C74
- Ligands
- CL, SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 475 | — | Q94C74 |
| B | — | protein | 474 | — | Q94C74 |
| C | — | protein | 473 | — | Q94C74 |
| D | — | protein | 480 | — | Q94C74 |
Ligands and binding sites
- CL · Chloride ion · ion · 4 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · 3 copies · chains C
- EDO · 1,2-ethanediol · additive · 28 copies · chains A, B, C, D
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains C, D
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PZZ · Crystal structure of serine hydroxymethyltransferase, isoform 2 from Arabidopsis thaliana… · the same entry in another collection · chain D against D, TM-score 1.00
- Q94C74 · AlphaFold monomer V2.0 prediction for serine hydroxymethyltransferase 2, mitochondrial… · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q94C74
- Elsewhere: RCSB PDB 7PZZ · PDBe 7PZZ · UniProt Q94C74
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