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MolNFT v1 · #185509 · protein

Crystal structure of the adenosine A2A receptor (A2A-PSB1-bril) in complex with preladenant conjugate psb-2115

7PYR: “Crystal structure of the adenosine A2A receptor (A2A-PSB1-bril) in complex with preladenant conjugate psb-2115”. X-ray diffraction, 3 ligands (OLA, CLR, 8IM). MolNFT v1 #185509 on GenesisL1: 3D structure, binding sites and pockets…

PDB
7PYR
Type
protein
Length
390 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P29274, P0ABE7
Ligands
OLA, CLR, 8IM

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein390—P29274, P0ABE7

Ligands and binding sites

  • OLA · Oleic acid · ligand · 25 copies · chains A
  • CLR · Cholesterol · ligand · 3 copies · chains A
  • 8IM · 2-[2-[2-[2-[2-[2-[4-[4-[2-[7-azanyl-4-(furan-2-yl)-3,5, 6,8,10,11-hexazatricyclo[7.3.0.0^{2,6}]dodeca-1(9),2, 4,7,11-pentaen-10-yl]ethyl]piperazin-1-yl]phenoxy]ethanoylamino]ethoxy]ethoxy]ethoxy]ethoxy]-~{N}-[5-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1,3-diaza-2$L^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-4,6,9, 11-tetraen-8-yl]pentyl]ethanamide · ligand · chains A
  • OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · 4 copies · chains A
  • PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7PYR · Crystal structure of the adenosine A2A receptor (A2A-PSB1-bRIL) in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
  • P29274 · AlphaFold monomer V2.0 prediction for adenosine receptor A2A (P29274) · a predicted model of the same protein · chain A against A, TM-score 0.77
  • P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain A against A, TM-score 0.26

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