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MolNFT v1 · #185176 · protein

Pfcyrpa bound to monoclonal antibody CY.004 Fab fragment

7PHW: “Pfcyrpa bound to monoclonal antibody CY.004 Fab fragment”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #185176 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7PHW
Type
protein
Length
1,494 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8IFM8
Ligands
CA

Structure

x-ray diffraction · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein317—Q8IFM8
B—protein223——
C—protein209——
D—protein312—Q8IFM8
E—protein226——
F—protein207——

Ligands and binding sites

  • CA · Calcium ion · metal · 4 copies · chains A, B, C, D, E, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7PHW · PfCyRPA bound to monoclonal antibody Cy.004 Fab fragment · the same entry in another collection · chain F against F, TM-score 1.00
  • Q8IFM8 · AlphaFold monomer V2.0 prediction for cysteine-rich protective antigen (Q8IFM8) · a predicted model of the same protein · chain A against A, TM-score 0.98

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