MolNFT v1 · #185067 · protein
Crystal structure of a mutated form of rxralpha ligand binding domain in complex with BMS649 and a coactivator fragment
7PDT: “Crystal structure of a mutated form of rxralpha ligand binding domain in complex with BMS649 and a…”. X-ray diffraction, 1 ligand (BM6). MolNFT v1 #185067 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PDT
- Type
- protein
- Length
- 437 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P28700, Q15596
- Ligands
- BM6
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 209 | — | P28700 |
| U | — | protein | 11 | — | Q15596 |
| B | — | protein | 208 | — | P28700 |
| V | — | protein | 9 | — | Q15596 |
Ligands and binding sites
- BM6 · 4-[2-(5,5,8,8-tetramethyl-5,6,7,8-tetrahydro-naphthalen-2-yl)-[1,3]dioxolan-2-yl]-benzoic acid · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PDT · Crystal structure of a mutated form of RXRalpha ligand binding domain in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- P28700 · AlphaFold monomer V2.0 prediction for retinoic acid receptor rxr- alpha (P28700) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28700
- Every structure of UniProt Q15596
- Elsewhere: RCSB PDB 7PDT · PDBe 7PDT · UniProt P28700 · UniProt Q15596
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