MolNFT v1 · #185023 · protein
The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1
7PC9: “The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #185023 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7PC9
- Type
- protein
- Length
- 812 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P57105, P07355, P03409
- Ligands
- CA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 397 | — | P57105, P07355 |
| A | — | protein | 407 | — | P57105, P07355 |
| C | — | protein | 8 | — | P03409 |
Ligands and binding sites
- CA · Calcium ion · metal · 10 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PC9 · The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1 · the same entry in another collection · chain C against C, TM-score 1.00
- P07355 · AlphaFold monomer V2.0 prediction for annexin A2 (P07355) · a predicted model of the same protein · chain B against A, TM-score 0.77
- P57105 · AlphaFold monomer V2.0 prediction for synaptojanin-2-binding protein (P57105) · a predicted model of the same protein · chain A against A, TM-score 0.24
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P57105
- Every structure of UniProt P07355
- Every structure of UniProt P03409
- Elsewhere: RCSB PDB 7PC9 · PDBe 7PC9 · UniProt P57105 · UniProt P07355 · UniProt P03409
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