MolNFT v1 · #184940 · protein
Crystal structure of YTHDC1 with compound YLI_DC1_008
7P8F: “Crystal structure of YTHDC1 with compound YLI_DC1_008”. X-ray diffraction, 2 ligands (5ZK, SO4). MolNFT v1 #184940 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7P8F
- Type
- protein
- Length
- 326 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q96MU7
- Ligands
- 5ZK, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 163 | — | Q96MU7 |
Ligands and binding sites
- 5ZK · ~{N},3-dimethyl-1~{H}-pyrazolo[4,3-d]pyrimidin-7-amine · ligand · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 6 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7P8F · Crystal structure of YTHDC1 with compound YLI_DC1_008 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96MU7
- Elsewhere: RCSB PDB 7P8F · PDBe 7P8F · UniProt Q96MU7
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