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Ligand · 5ZK

5ZK · ~{N},3-dimethyl-1~{H}-pyrazolo[4,3-d]pyrimidin-7-amine

5ZK, ~{N},3-dimethyl-1~{H}-pyrazolo[4,3-d]pyrimidin-7-amine (C7 H9 N5, 163.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
5ZK
Formula
C7 H9 N5
Class
ligand
Structures
4
PDB entries
2

Binding sites

5ZK in 4 structures; the first of them:

  • 7P8F · Crystal structure of YTHDC1 with compound YLI_DC1_008 · 5ZK A601 · binds LYS361, SER362, ASN363, ASN364, ASN367, TRP377, SER378, THR379 and 5 more
  • 7Z5M · Crystal structure of YTHDF2 with compound YLI_DC1_008 · 5ZK A606 · binds LYS416, SER417, TYR418, SER419, ASP422, TRP432, CYS433, SER434 and 4 more
  • 7P8F · Crystal structure of YTHDC1 with compound YLI_DC1_008 · 5ZK A601 · binds LYS361, SER362, ASN363, ASN367, TRP377, SER378, TRP428, PRO431 and 2 more
  • 7Z5M · Crystal structure of YTHDF2 with compound YLI_DC1_008 · 5ZK A606 · binds LYS416, SER417, TYR418, ASP422, TRP432, CYS433, SER434, TRP486 and 2 more

Residues it binds most

TRP 8, SER 8, ASP 8, ASN 5, LYS 8, CYS 4, LEU 4, PRO 4, TYR 4, THR 3 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • CL · Chloride ion
  • GOL · Glycerol

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