MolNFT v1 · #184742 · protein
Galectin-8 N-terminal carbohydrate recognition domain in complex with quinoline D-galactal ligand
7P11: “Galectin-8 N-terminal carbohydrate recognition domain in complex with quinoline D-galactal ligand”. X-ray diffraction, 2 ligands (5KM, CL). MolNFT v1 #184742 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7P11
- Type
- protein
- Length
- 299 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O00214
- Ligands
- 5KM, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 150 | — | O00214 |
| B | — | protein | 149 | — | O00214 |
Ligands and binding sites
- 5KM · 2-[[(2~{R},3~{R},4~{R})-2-(hydroxymethyl)-3-oxidanyl-3, 4-dihydro-2~{H}-pyran-4-yl]oxymethyl]quinoline-7-carboxylic acid · ligand · 2 copies · chains A, B
- CL · Chloride ion · ion · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7P11 · Galectin-8 N-terminal carbohydrate recognition domain in complex with quinoline… · the same entry in another collection · chain A against A, TM-score 1.00
- O00214 · AlphaFold monomer V2.0 prediction for galectin-8 (O00214) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00214
- Elsewhere: RCSB PDB 7P11 · PDBe 7P11 · UniProt O00214
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