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Ligand · 5KM

5KM · 2-[[(2~{R},3~{R},4~{R})-2-(hydroxymethyl)-3-oxidanyl-3, 4-dihydro-2~{H}-pyran-4-yl]oxymethyl]quinoline-7-carboxylic acid

5KM, 2-[[(2~{R},3~{R},4~{R})-2-(hydroxymethyl)-3-oxidanyl-3, 4-dihydro-2~{H}-pyran-4-yl]oxymethyl]quinoline-7-carboxylic acid (C17 H17 N O6, 331.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
5KM
Formula
C17 H17 N O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

5KM in 2 structures; the first of them:

  • 7P11 · Galectin-8 N-terminal carbohydrate recognition domain in complex with quinoline… · 5KM A201 · binds ARG45, GLN47, ARG59, HIS65, ASN67, ARG69, VAL77, ASN79 and 4 more
  • 7P11 · Galectin-8 N-terminal carbohydrate recognition domain in complex with quinoline… · 5KM A201 · binds ARG45, GLN47, ARG59, HIS65, ASN67, ARG69, VAL77, ASN79 and 4 more

Residues it binds most

ARG 4, ASN 4, GLN 4, GLU 4, GLY 4, HIS 4, TRP 4, TYR 4, VAL 4, LYS 1 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion

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