GL1X · GenesisL1 explorer

MolNFT v1 · #184460 · protein

Ternary complex of 14-3-3 sigma, amot-P130 phosphopeptide, and WQ178

7OQW · 14-3-3 protein sigma: “Ternary complex of 14-3-3 sigma, amot-P130 phosphopeptide, and WQ178”. X-ray diffraction, 2 ligands (0B7, MG), 1 pocket (best druggability 0.40). MolNFT v1 #184460 on GenesisL1: 3D structure, binding sites and…

PDB
7OQW
Type
protein
Length
229 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
14-3-3 protein sigma; Amot-P130 phosphopeptide (PS175)
UniProt
P31947, Q4VCS5
Ligands
0B7, MG
Pockets
1 · best druggability 0.40

Structure

x-ray diffraction · 2 distinct chains · 83% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A14-3-3 protein sigmaprotein22484% helix, 0% strandP31947
PAmot-P130 phosphopeptide (PS175)protein50% helix, 0% strandQ4VCS5

Ligands and binding sites

  • 0B7 · ~{N}-[(5-carbamimidoyl-3-phenyl-thiophen-2-yl)methyl]-1~{H}-indole-6-carboxamide · ligand · 2 copies · chains A
  • MG · Magnesium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11140.400.7516empty

Interfaces

1 interface between chains.

  • A–P · 518 Ų buried · 16 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (oxidation, phosphorylation).

Compared structures

  • 7OQW · Ternary complex of 14-3-3 sigma, Amot-p130 phosphopeptide, and WQ178 · the same entry in another collection · chain A against A, TM-score 1.00
  • P31947 · AlphaFold monomer V2.0 prediction for 14-3-3 protein sigma (P31947) · a predicted model of the same protein · chain A against A, TM-score 0.96
  • Q4VCS5 · AlphaFold monomer V2.0 prediction for angiomotin (Q4VCS5) · a predicted model of the same protein · chain P against A, TM-score 0.62

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.