MolNFT v1 · #182239 · protein + DNA
RNA polymerase II pre-initiation complex (PIC3)
7ML2: “RNA polymerase II pre-initiation complex (PIC3)”. Electron microscopy, 3 ligands (SF4, ZN, MG). MolNFT v1 #182239 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7ML2
- Type
- protein + DNA
- Length
- 8,315 residues
- Chains
- 30
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A6A5Q1P2, A0A6A5Q4H2, A0A6A5Q0Z3, A0A6A5PTI6, A0A6A5Q456, A0A6L0ZRI7, A0A6A5Q270, A0A6A5Q8C2, A0A7I9EWC2, A0A6A5Q7Q6, A0A6A5Q7A1, A0A6A5PY05, P29055, P41895, A0A6A5PZ00, A0A6A5Q2T8, A0A6A5PRZ0, A0A6A5PTU5, A0A6A5PS93, G4XSG8, A0A6A5Q1C1, A0A6A5Q2X3, Q3E7C1, Q00578, A0A7I9BTI9
- Ligands
- SF4, ZN, MG
Structure
electron microscopy · 30 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1398 | — | A0A6A5Q1P2 |
| B | — | protein | 1152 | — | A0A6A5Q4H2 |
| C | — | protein | 262 | — | A0A6A5Q0Z3 |
| D | — | protein | 157 | — | A0A6A5PTI6 |
| E | — | protein | 213 | — | A0A6A5Q456 |
| F | — | protein | 83 | — | A0A6L0ZRI7 |
| G | — | protein | 171 | — | A0A6A5Q270 |
| H | — | protein | 136 | — | A0A6A5Q8C2 |
| I | — | protein | 116 | — | A0A7I9EWC2 |
| J | — | protein | 65 | — | A0A6A5Q7Q6 |
| K | — | protein | 112 | — | A0A6A5Q7A1 |
| L | — | protein | 45 | — | A0A6A5PY05 |
| M | — | protein | 279 | — | P29055 |
| Q | — | protein | 148 | — | P41895 |
| R | — | protein | 190 | — | A0A6A5PZ00 |
| U | — | protein | 46 | — | A0A6A5Q2T8 |
| V | — | protein | 49 | — | A0A6A5PRZ0 |
| W | — | protein | 191 | — | A0A6A5PTU5 |
| X | — | protein | 156 | — | A0A6A5PS93 |
| T | — | dna | 56 | — | — |
| N | — | dna | 56 | — | — |
| O | — | protein | 180 | — | G4XSG8 |
| 1 | — | protein | 367 | — | — |
| 4 | — | protein | 284 | — | — |
| 0 | — | protein | 754 | — | A0A6A5Q1C1 |
| 6 | — | protein | 351 | — | — |
| 2 | — | protein | 460 | — | A0A6A5Q2X3 |
| 5 | — | protein | 66 | — | Q3E7C1 |
| 7 | — | protein | 634 | — | Q00578 |
| 3 | — | protein | 138 | — | A0A7I9BTI9 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · chains 0
- ZN · Zinc ion · metal · 17 copies · chains A, B, C, I, J, L, M, W, 4, 6, 3
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ML2 · RNA polymerase II pre-initiation complex (PIC3) · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A6A5Q1P2
- Every structure of UniProt A0A6A5Q4H2
- Every structure of UniProt A0A6A5Q0Z3
- Every structure of UniProt A0A6A5PTI6
- Every structure of UniProt A0A6A5Q456
- Every structure of UniProt A0A6L0ZRI7
- Every structure of UniProt A0A6A5Q270
- Every structure of UniProt A0A6A5Q8C2
- Every structure of UniProt A0A7I9EWC2
- Every structure of UniProt A0A6A5Q7Q6
- Every structure of UniProt A0A6A5Q7A1
- Every structure of UniProt A0A6A5PY05
- Every structure of UniProt P29055
- Every structure of UniProt P41895
- Every structure of UniProt A0A6A5PZ00
- Every structure of UniProt A0A6A5Q2T8
- Every structure of UniProt A0A6A5PRZ0
- Every structure of UniProt A0A6A5PTU5
- Every structure of UniProt A0A6A5PS93
- Every structure of UniProt G4XSG8
- Every structure of UniProt A0A6A5Q1C1
- Every structure of UniProt A0A6A5Q2X3
- Every structure of UniProt Q3E7C1
- Every structure of UniProt Q00578
- Every structure of UniProt A0A7I9BTI9
- Elsewhere: RCSB PDB 7ML2 · PDBe 7ML2 · UniProt A0A6A5Q1P2 · UniProt A0A6A5Q4H2 · UniProt A0A6A5Q0Z3 · UniProt A0A6A5PTI6 · UniProt A0A6A5Q456 · UniProt A0A6L0ZRI7 · UniProt A0A6A5Q270 · UniProt A0A6A5Q8C2 · UniProt A0A7I9EWC2 · UniProt A0A6A5Q7Q6 · UniProt A0A6A5Q7A1 · UniProt A0A6A5PY05 · UniProt P29055 · UniProt P41895 · UniProt A0A6A5PZ00 · UniProt A0A6A5Q2T8 · UniProt A0A6A5PRZ0 · UniProt A0A6A5PTU5 · UniProt A0A6A5PS93 · UniProt G4XSG8 · UniProt A0A6A5Q1C1 · UniProt A0A6A5Q2X3 · UniProt Q3E7C1 · UniProt Q00578 · UniProt A0A7I9BTI9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.