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MolNFT v1 · #181535 · protein

Structure of plasmodium falciparum 20S proteasome with bound bortezomib

7LXT: “Structure of plasmodium falciparum 20S proteasome with bound bortezomib”. Electron microscopy, 1 ligand (BO2). MolNFT v1 #181535 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7LXT
Type
protein
Length
6,318 residues
Chains
28
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8IAR3, C6KST3, Q8IDG3, Q8IDG2, Q8IBI3, Q8IK90, O77396, Q8I0U7, Q8I6T3, Q8I261, Q8IKC9, Q8IJT1, A0A5K1K7U1, Q7K6A9
Ligands
BO2

Structure

electron microscopy · 14 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, O—protein252—Q8IAR3
B, P—protein227—C6KST3
C, Q—protein242—Q8IDG3
D, R—protein233—Q8IDG2
E, S—protein233—Q8IBI3
F, T—protein235—Q8IK90
G, U—protein240—O77396
H, V—protein220—Q8I0U7
I, W—protein218—Q8I6T3
J, X—protein215—Q8I261
K, Y—protein195—Q8IKC9
L, Z—protein209—Q8IJT1
M, a—protein213—A0A5K1K7U1
N, b—protein227—Q7K6A9

Ligands and binding sites

  • BO2 · N-[(1R)-1-(dihydroxyboryl)-3-methylbutyl]-N-(pyrazin-2-ylcarbonyl)-L-phenylalaninamide · ligand · 6 copies · chains H, I, J, L, M, V, W, X, Z, a

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7LXT · Structure of Plasmodium falciparum 20S proteasome with bound bortezomib · the same entry in another collection · chain B against B, TM-score 1.00

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