MolNFT v1 · #180583 · protein + DNA

Crystal structure of the DRM2-ctg DNA complex

7L4H: “Crystal structure of the DRM2-ctg DNA complex”. X-ray diffraction, 1 ligand (IOD). MolNFT v1 #180583 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7L4H
Type: protein + DNA
Length: 389 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9M548
Ligands: IOD

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	353	—	Q9M548
B	—	dna	18	—	—
C	—	dna	18	—	—

Ligands and binding sites

IOD · Iodide ion · ion · 5 copies · chains A
GOL · Glycerol · additive · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7L4H · Crystal structure of the DRM2-CTG DNA complex · the same entry in another collection · chain B against B, TM-score 1.00
Q9M548 · AlphaFold monomer V2.0 prediction for DNA (cytosine-5)-methyltransferase DRM2 (Q9M548) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9M548
Elsewhere: RCSB PDB 7L4H · PDBe 7L4H · UniProt Q9M548

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