MolNFT v1 · #179959 · protein
Cocrystal structure of human camkii-alpha (CAMK2A)KINASE domain and GLUN2B(S1303D)
7KL2 · CALCIUM/CALMODULIN-dependent protein kinase type II subunit…: “Cocrystal structure of human camkii-alpha (CAMK2A)KINASE domain and GLUN2B(S1303D)”. X-ray diffraction, 3 pockets (best druggability 0.70). MolNFT v1 #179959 on…
- PDB
- 7KL2
- Type
- protein
- Length
- 284 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CALCIUM/CALMODULIN-dependent protein kinase type II subunit alpha; Glutamate receptor…
- EC
- 2.7.11.17
- UniProt
- Q9UQM7, Q13224
- Pockets
- 3 · best druggability 0.70
Structure
x-ray diffraction · 2 distinct chains · 35% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | CALCIUM/CALMODULIN-dependent protein kinase type II subunit alpha (EC 2.7.11.17) | protein | 268 | 37% helix, 18% strand | Q9UQM7 |
| B | Glutamate receptor ionotropic, NMDA 2B | protein | 16 | 0% helix, 6% strand | Q13224 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 577 | 0.70 | 0.79 | 44 | empty |
| 2 | 76 | 0.40 | 0.79 | 17 | empty |
| 3 | 59 | 0.29 | 0.74 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 1091 Ų buried · 21 hydrogen bonds · protein-protein
Compared structures
- 7KL2 · Cocrystal structure of human CaMKII-alpha (CAMK2A)kinase domain and GluN2B(S1303D) · the same entry in another collection · chain B against B, TM-score 1.00
- Q9UQM7 · AlphaFold monomer V2.0 prediction for CALCIUM/CALMODULIN-dependent protein kinase type II… · a predicted model of the same protein · chain A against A, TM-score 0.96
- Q13224 · AlphaFold monomer V2.0 prediction for glutamate receptor ionotropic, NMDA 2B (Q13224) · a predicted model of the same protein · chain B against A, TM-score 0.30
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UQM7
- Every structure of UniProt Q13224
- Elsewhere: RCSB PDB 7KL2 · PDBe 7KL2 · UniProt Q9UQM7 · UniProt Q13224
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