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MolNFT v1 · #179865 · protein

PRMT5:MEP50 complexed with 5,5-bicyclic inhibitor compound 34

7KIC: “PRMT5:MEP50 complexed with 5,5-bicyclic inhibitor compound 34”. X-ray diffraction, 1 ligand (WFS). MolNFT v1 #179865 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7KIC
Type
protein
Length
936 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O14744, Q9BQA1
Ligands
WFS

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein625—O14744
B—protein311—Q9BQA1

Ligands and binding sites

  • WFS · (2r,3r,3as,6s,6ar)-6-[(2-amino-3-bromoquinolin-7-yl) oxy]-2-(4-methyl-7H-pyrrolo[2,3-d]pyrimidin-7-yl) hexahydro-3AH-cyclopenta[b]furan-3,3A-diol · ligand · chains A
  • EDO · 1,2-ethanediol · additive · 6 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7KIC · PRMT5:MEP50 Complexed with 5,5-Bicyclic Inhibitor Compound 34 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9BQA1 · AlphaFold monomer V2.0 prediction for methylosome protein 50 (Q9BQA1) · a predicted model of the same protein · chain B against A, TM-score 0.99
  • O14744 · AlphaFold monomer V2.0 prediction for protein arginine N-methyltransferase 5 (O14744) · a predicted model of the same protein · chain A against A, TM-score 0.97

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