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MolNFT v1 · #179809 · protein

Crystal structure of HLA-A*0201IN complex with SARS-cov-2 N222-230

7KGQ: “Crystal structure of HLA-A*0201IN complex with SARS-cov-2 N222-230”. X-ray diffraction, 2 ligands (CD, CA). MolNFT v1 #179809 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7KGQ
Type
protein
Length
384 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q861F7, P61769, P0DTC9
Ligands
CD, CA

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein276—Q861F7
B—protein99—P61769
C—protein9—P0DTC9

Ligands and binding sites

  • CD · Cadmium ion · metal · 2 copies · chains A
  • CA · Calcium ion · metal · 2 copies · chains A, B
  • EDO · 1,2-ethanediol · additive · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7KGQ · Crystal Structure of HLA-A*0201in complex with SARS-CoV-2 N222-230 · the same entry in another collection · chain A against A, TM-score 1.00
  • P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.99

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