MolNFT v1 · #178677 · protein
Room temperature crystal structure of NSP10/NSP16 from SARS-cov-2 with substrates and products of 2'-O-methylation of the cap-1
7JIB: “Room temperature crystal structure of NSP10/NSP16 from SARS-cov-2 with substrates and products of…”. X-ray diffraction, 5 ligands (GTA, V9G, MGP). MolNFT v1 #178677 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JIB
- Type
- protein
- Length
- 415 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- GTA, V9G, MGP, ZN, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 301 | — | P0DTD1 |
| B | — | protein | 114 | — | P0DTD1 |
Ligands and binding sites
- GTA · P1-7-methylguanosine-P3-adenosine-5',5'-triphosphate · ligand · chains A
- V9G · 7-methyl-guanosine-5'-triphosphate-5'-(2'-O-methyl)-adenosine · ligand · chains A
- MGP · 7-methyl-guanosine-5'-triphosphate · ligand · chains A
- ZN · Zinc ion · metal · 2 copies · chains B
- CL · Chloride ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JIB · Room Temperature Crystal Structure of Nsp10/Nsp16 from SARS-CoV-2 with Substrates and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 7JIB · PDBe 7JIB · UniProt P0DTD1
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