GL1X · GenesisL1 explorer

MolNFT v1 · #176781 · protein

Structure of SAR7334-bound TRPC6 at 2.9 ångström

7DXG: “Structure of SAR7334-bound TRPC6 at 2.9 ångström”. Electron microscopy, 6 ligands (Y01, HOR, POV). MolNFT v1 #176781 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7DXG
Type
protein
Length
2,792 residues
Chains
4
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9Y210
Ligands
Y01, HOR, POV, 98R, CA, ZN

Structure

electron microscopy · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D—protein698—Q9Y210

Ligands and binding sites

  • Y01 · Cholesterol hemisuccinate · ligand · 16 copies · chains A, D, C, B
  • HOR · 4-[[(1R,2R)-2-[(3R)-3-azanylpiperidin-1-yl]-2,3-dihydro-1H-inden-1-yl]oxy]-3-chloranyl-benzenecarbonitrile · ligand · 4 copies · chains A, B, C, D
  • POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate · ligand · 4 copies · chains A, C, D, B
  • 98R · [(2S)-2-[(E)-octadec-10-enoyl]oxy-3-oxidanyl-propyl] octadec-10-enoate · ligand · 4 copies · chains A, D, C, B
  • CA · Calcium ion · metal · 8 copies · chains A, D, B, C
  • ZN · Zinc ion · metal · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7DXG · Structure of SAR7334-bound TRPC6 at 2.9 angstrom · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9Y210 · AlphaFold monomer V2.0 prediction for short transient receptor potential channel 6… · a predicted model of the same protein · chain A against A, TM-score 0.91

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