MolNFT v1 · #176476 · protein
Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)
7DNY: “Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)”. Electron microscopy, 2 ligands (Y01, HT9). MolNFT v1 #176476 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DNY
- Type
- protein
- Length
- 1,146 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9NP58
- Ligands
- Y01, HT9
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 571 | — | Q9NP58 |
| B | — | protein | 575 | — | Q9NP58 |
Ligands and binding sites
- Y01 · Cholesterol hemisuccinate · ligand · 5 copies · chains A, B
- HT9 · coproporphyrin III · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DNY · Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound) · the same entry in another collection · chain B against B, TM-score 1.00
- Q9NP58 · AlphaFold monomer V2.0 prediction for ATP-binding cassette sub-family B member 6… · a predicted model of the same protein · chain B against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NP58
- Elsewhere: RCSB PDB 7DNY · PDBe 7DNY · UniProt Q9NP58
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