MolNFT v1 · #174941 · protein
Crystal structure of snake venom phosphodiesterase (pde) from taiwan cobra (naja atra atra) in complex with isorhamnetin and citrate
7CBA: “Crystal structure of snake venom phosphodiesterase (pde) from taiwan cobra (naja atra atra) in complex with…”. X-ray diffraction, 5 ligands (IRH, NAG, BMA). MolNFT v1 #174941 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7CBA
- Type
- protein
- Length
- 1,536 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2D0TC04
- Ligands
- IRH, NAG, BMA, ZN, CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 768 | — | A0A2D0TC04 |
| B | — | protein | 768 | — | A0A2D0TC04 |
Ligands and binding sites
- IRH · isorhamnetin · ligand · 2 copies · chains A, B
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 11 copies · chains A, B
- BMA · beta-D-mannopyranose · sugar · 2 copies
- ZN · Zinc ion · metal · 4 copies · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
- CIT · Citric acid · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CBA · Crystal structure of snake venom phosphodiesterase (PDE) from Taiwan cobra (Naja atra… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2D0TC04
- Elsewhere: RCSB PDB 7CBA · PDBe 7CBA · UniProt A0A2D0TC04
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.