MolNFT v1 · #174877 · protein + DNA
Cryo-EM structure of an escherichia COLI rnap-promoter open complex (rpo) with sspa
7C97: “Cryo-EM structure of an escherichia COLI rnap-promoter open complex (rpo) with sspa”. Electron microscopy, 2 ligands (ZN, MG). MolNFT v1 #174877 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7C97
- Type
- protein + DNA
- Length
- 4,275 residues
- Chains
- 11
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- H4IXP2, F4VJT6, P0A8V2, M9GTE2, T9C803, Q0P6L9
- Ligands
- ZN, MG
Structure
electron microscopy · 11 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | dna | 63 | — | — |
| I | — | protein | 206 | — | H4IXP2 |
| J | — | protein | 201 | — | H4IXP2 |
| K | — | protein | 67 | — | F4VJT6 |
| A | — | protein | 230 | — | F4VJT6 |
| B | — | protein | 226 | — | F4VJT6 |
| C | — | protein | 1340 | — | P0A8V2 |
| D | — | protein | 1343 | — | M9GTE2 |
| E | — | protein | 79 | — | T9C803 |
| F | — | protein | 472 | — | Q0P6L9 |
| G | — | dna | 48 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7C97 · Cryo-EM structure of an Escherichia coli RNAP-promoter open complex (RPo) with SspA · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt H4IXP2
- Every structure of UniProt F4VJT6
- Every structure of UniProt P0A8V2
- Every structure of UniProt M9GTE2
- Every structure of UniProt T9C803
- Every structure of UniProt Q0P6L9
- Elsewhere: RCSB PDB 7C97 · PDBe 7C97 · UniProt H4IXP2 · UniProt F4VJT6 · UniProt P0A8V2 · UniProt M9GTE2 · UniProt T9C803 · UniProt Q0P6L9
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