MolNFT v1 · #174586 · protein + RNA
Crystal structure of yeast U2AF1 complex bound to 3' splice site RNA, 5'-uaggu.
7C06: “Crystal structure of yeast U2AF1 complex bound to 3' splice site RNA, 5'-uaggu.”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #174586 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7C06
- Type
- protein + RNA
- Length
- 2,190 residues
- Chains
- 27
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q09176, P36629
- Ligands
- ZN
Structure
x-ray diffraction · 14 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, J | — | protein | 193 | — | Q09176 |
| B | — | protein | 56 | — | P36629 |
| C, F, I, L, O, R, U, X, 1 | — | rna | 5 | — | — |
| D | — | protein | 187 | — | Q09176 |
| E | — | protein | 51 | — | P36629 |
| G, P | — | protein | 192 | — | Q09176 |
| H, N, Q, W | — | protein | 53 | — | P36629 |
| K | — | protein | 54 | — | P36629 |
| M | — | protein | 178 | — | Q09176 |
| S | — | protein | 186 | — | Q09176 |
| T | — | protein | 50 | — | P36629 |
| V | — | protein | 174 | — | Q09176 |
| Y | — | protein | 179 | — | Q09176 |
| Z | — | protein | 48 | — | P36629 |
Ligands and binding sites
- ZN · Zinc ion · metal · 18 copies · chains A, C, D, F, G, I, J, M, O, P, R, S, U, V, X, Y, 1
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7C06 · Crystal structure of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU. · the same entry in another collection · chain K against K, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q09176
- Every structure of UniProt P36629
- Elsewhere: RCSB PDB 7C06 · PDBe 7C06 · UniProt Q09176 · UniProt P36629
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