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MolNFT v1 · #174533 · protein

Structure of SHMT2 in complex with cbx

7BYI: “Structure of SHMT2 in complex with cbx”. X-ray diffraction, 2 ligands (CBO, PO4). MolNFT v1 #174533 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7BYI
Type
protein
Length
925 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P34897
Ligands
CBO, PO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein463—P34897
B—protein462—P34897

Ligands and binding sites

  • CBO · Carbenoxolone · ligand · 2 copies · chains A, B
  • PO4 · Phosphate ion · ion · 2 copies · chains A, B
  • PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7BYI · Structure of SHMT2 in complex with CBX · the same entry in another collection · chain A against A, TM-score 1.00
  • P34897 · AlphaFold monomer V2.0 prediction for serine hydroxymethyltransferase, mitochondrial… · a predicted model of the same protein · chain A against A, TM-score 0.99

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