GL1X · GenesisL1 explorer

MolNFT v1 · #173759 · protein

Cys-42-tethered stabilizer 7 of 14-3-3(SIGMA)/ERA ppi

7BA5 · 14-3-3 protein sigma: “Cys-42-tethered stabilizer 7 of 14-3-3(SIGMA)/ERA ppi”. X-ray diffraction, 2 ligands (T5T, MG), 1 pocket (best druggability 0.49). MolNFT v1 #173759 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
7BA5
Type
protein
Length
242 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
14-3-3 protein sigma; Estrogen receptor
UniProt
P31947, P03372
Ligands
T5T, MG
Pockets
1 · best druggability 0.49

Structure

x-ray diffraction · 2 distinct chains · 78% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A14-3-3 protein sigmaprotein23680% helix, 0% strandP31947
BEstrogen receptorprotein60% helix, 0% strandP03372

Ligands and binding sites

  • T5T · 2-(4-fluoranylphenoxy)-2-methyl-~{N}-(2-sulfanylethyl) propanamide · ligand · chains A, B
  • MG · Magnesium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11180.490.7922T5T

Interfaces

1 interface between chains.

  • A–B · 511 Ų buried · 12 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 covalent, 1 modified (covalent ligand, phosphorylation).

Compared structures

  • 7BA5 · Cys-42-tethered stabilizer 7 of 14-3-3(sigma)/ERa PPI · the same entry in another collection · chain A against A, TM-score 1.00
  • P31947 · AlphaFold monomer V2.0 prediction for 14-3-3 protein sigma (P31947) · a predicted model of the same protein · chain A against A, TM-score 0.95
  • P03372 · AlphaFold monomer V2.0 prediction for estrogen receptor (P03372) · a predicted model of the same protein · chain B against A, TM-score 0.54

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.