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MolNFT v1 · #173138 · protein

Pseudomonas stutzeri nitrous oxide reductase mutant, H583D

7AQ3: “Pseudomonas stutzeri nitrous oxide reductase mutant, H583D”. X-ray diffraction, 7 ligands (CUA, CUZ, NA). MolNFT v1 #173138 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7AQ3
Type
protein
Length
1,155 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P19573
Ligands
CUA, CUZ, NA, ZN, CA, K, CL

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein569—P19573
B—protein586—P19573

Ligands and binding sites

  • CUA · Dinuclear copper ion · ligand · 2 copies · chains A, B
  • CUZ · (mu-4-sulfido)-tetra-nuclear copper ion · ligand · chains B
  • NA · Sodium ion · metal · 2 copies · chains A, B
  • ZN · Zinc ion · metal · 2 copies · chains A
  • CA · Calcium ion · metal · chains B
  • K · Potassium ion · metal · chains B
  • CL · Chloride ion · ion · 2 copies · chains A, B
  • FMT · Formic acid · additive · 13 copies · chains A, B
  • B3P · 2-[3-(2-hydroxy-1,1-dihydroxymethyl-ethylamino)-propylamino]-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, B
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7AQ3 · Pseudomonas stutzeri nitrous oxide reductase mutant, H583D · the same entry in another collection · chain B against B, TM-score 1.00
  • P19573 · AlphaFold monomer V2.0 prediction for nitrous-oxide reductase (P19573) · a predicted model of the same protein · chain A against A, TM-score 1.00

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