MolNFT v1 · #172693 · protein
Crystal structure of the F-bar domain of PSTIPIP1 bound to the cth domain of the phosphatase lyp
7AAM · Proline-serine-threonine phosphatase-interacting protein 1: “Crystal structure of the F-bar domain of PSTIPIP1 bound to the cth domain of the phosphatase lyp”. X-ray diffraction, 1 pocket (best druggability 0.74). MolNFT v1 #172693…
- PDB
- 7AAM
- Type
- protein
- Length
- 586 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Proline-serine-threonine phosphatase-interacting protein 1; Tyrosine-protein phosphatase…
- EC
- 3.1.3.48
- UniProt
- O43586, Q9Y2R2
- Pockets
- 1 · best druggability 0.74
Structure
x-ray diffraction · 3 distinct chains · 82% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline-serine-threonine phosphatase-interacting protein 1 | protein | 285 | 85% helix, 1% strand | O43586 |
| B | Proline-serine-threonine phosphatase-interacting protein 1 | protein | 287 | 84% helix, 1% strand | O43586 |
| C | Tyrosine-protein phosphatase non-receptor type 22 (EC 3.1.3.48) | protein | 14 | 0% helix, 0% strand | Q9Y2R2 |
Ligands and binding sites
- GOL · Glycerol · additive · 2 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 60 | 0.74 | 0.99 | 22 | empty |
Interfaces
3 interfaces between chains.
- A–B · 5198 Ų buried · 61 hydrogen bonds · protein-protein
- A–C · 489 Ų buried · 5 hydrogen bonds · protein-protein
- B–C · 418 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 7AAM · Crystal structure of the F-BAR domain of PSTIPIP1 bound to the CTH domain of the… · the same entry in another collection · chain A against A, TM-score 1.00
- O43586 · AlphaFold monomer V2.0 prediction for proline-serine-threonine phosphatase-interacting… · a predicted model of the same protein · chain B against A, TM-score 0.98
- Q9Y2R2 · AlphaFold monomer V2.0 prediction for tyrosine-protein phosphatase non-receptor type 22… · a predicted model of the same protein · chain C against A, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O43586
- Every structure of UniProt Q9Y2R2
- Elsewhere: RCSB PDB 7AAM · PDBe 7AAM · UniProt O43586 · UniProt Q9Y2R2
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