MolNFT v1 · #172078 · protein
Bovine ATP synthase monomer state 2 (combined)
6ZQM: “Bovine ATP synthase monomer state 2 (combined)”. Electron microscopy, 5 ligands (ATP, ADP, CDL). MolNFT v1 #172078 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZQM
- Type
- protein
- Length
- 5,155 residues
- Chains
- 29
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P19483, P00829, P05631, P05630, P05632, P01096, P07926, P13621, P03929, P00847, P13620, Q28851, Q28852, P14790, P13619, P02721, Q3ZBI7, Q00361
- Ligands
- ATP, ADP, CDL, LHG, MG
Structure
electron microscopy · 22 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 486 | — | P19483 |
| B | — | protein | 495 | — | P19483 |
| C | — | protein | 501 | — | P19483 |
| D | — | protein | 469 | — | P00829 |
| E, F | — | protein | 467 | — | P00829 |
| G | — | protein | 272 | — | P05631 |
| H | — | protein | 132 | — | P05630 |
| I | — | protein | 47 | — | P05632 |
| J | — | protein | 47 | — | P01096 |
| K, M, N, O, P, Q, R | — | protein | 74 | — | P07926 |
| L | — | protein | 75 | — | P07926 |
| S | — | protein | 188 | — | P13621 |
| 8 | — | protein | 38 | — | P03929 |
| a | — | protein | 226 | — | P00847 |
| d | — | protein | 154 | — | P13620 |
| f | — | protein | 83 | — | Q28851 |
| g | — | protein | 79 | — | Q28852 |
| j | — | protein | 48 | — | P14790 |
| b | — | protein | 209 | — | P13619 |
| h | — | protein | 62 | — | P02721 |
| k | — | protein | 36 | — | Q3ZBI7 |
| e | — | protein | 56 | — | Q00361 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 3 copies · chains A, D, B, E, C, F
- ADP · Adenosine-5'-diphosphate · ligand · 3 copies · chains C, D, E, B, F
- CDL · Cardiolipin · ligand · 3 copies · chains 8, a, f, j, g, b
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · ligand · 2 copies · chains f, b
- MG · Magnesium ion · metal · 5 copies · chains A, B, C, D, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ZQM · bovine ATP synthase monomer state 2 (combined) · the same entry in another collection · chain K against K, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19483
- Every structure of UniProt P00829
- Every structure of UniProt P05631
- Every structure of UniProt P05630
- Every structure of UniProt P05632
- Every structure of UniProt P01096
- Every structure of UniProt P07926
- Every structure of UniProt P13621
- Every structure of UniProt P03929
- Every structure of UniProt P00847
- Every structure of UniProt P13620
- Every structure of UniProt Q28851
- Every structure of UniProt Q28852
- Every structure of UniProt P14790
- Every structure of UniProt P13619
- Every structure of UniProt P02721
- Every structure of UniProt Q3ZBI7
- Every structure of UniProt Q00361
- Elsewhere: RCSB PDB 6ZQM · PDBe 6ZQM · UniProt P19483 · UniProt P00829 · UniProt P05631 · UniProt P05630 · UniProt P05632 · UniProt P01096 · UniProt P07926 · UniProt P13621 · UniProt P03929 · UniProt P00847 · UniProt P13620 · UniProt Q28851 · UniProt Q28852 · UniProt P14790 · UniProt P13619 · UniProt P02721 · UniProt Q3ZBI7 · UniProt Q00361
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