MolNFT v1 · #171487 · protein
Globular head of C1Q in complex with the nanobody C1QNB75
6Z6V: “Globular head of C1Q in complex with the nanobody C1QNB75”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #171487 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Z6V
- Type
- protein
- Length
- 1,036 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P02745, P02746, P02747
- Ligands
- NAG
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 133 | — | P02745 |
| B, E | — | protein | 133 | — | P02746 |
| C | — | protein | 128 | — | P02747 |
| D | — | protein | 133 | — | P02745 |
| F | — | protein | 131 | — | P02747 |
| G | — | protein | 122 | — | — |
| H | — | protein | 123 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Z6V · Globular head of C1q in complex with the nanobody C1qNb75 · the same entry in another collection · chain H against H, TM-score 1.00
- P02746 · AlphaFold monomer V2.0 prediction for complement C1Q subcomponent subunit B (P02746) · a predicted model of the same protein · chain E against A, TM-score 0.99
- P02747 · AlphaFold monomer V2.0 prediction for complement C1Q subcomponent subunit C (P02747) · a predicted model of the same protein · chain C against A, TM-score 0.99
- P02745 · AlphaFold monomer V2.0 prediction for complement C1Q subcomponent subunit a (P02745) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02745
- Every structure of UniProt P02746
- Every structure of UniProt P02747
- Elsewhere: RCSB PDB 6Z6V · PDBe 6Z6V · UniProt P02745 · UniProt P02746 · UniProt P02747
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.