MolNFT v1 · #171238 · protein
Bovine ATP synthase F1-peripheral stalk domain, state 1
6YY0: “Bovine ATP synthase F1-peripheral stalk domain, state 1”. Electron microscopy, 3 ligands (ATP, ADP, MG). MolNFT v1 #171238 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YY0
- Type
- protein
- Length
- 3,926 residues
- Chains
- 14
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P19483, P00829, P05631, P05630, P05632, P01096, P13621, P13619, P13620, P02721
- Ligands
- ATP, ADP, MG
Structure
electron microscopy · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 508 | — | P19483 |
| B | — | protein | 477 | — | P19483 |
| C | — | protein | 498 | — | P19483 |
| D | — | protein | 469 | — | P00829 |
| E, F | — | protein | 467 | — | P00829 |
| G | — | protein | 272 | — | P05631 |
| H | — | protein | 132 | — | P05630 |
| I | — | protein | 47 | — | P05632 |
| J | — | protein | 47 | — | P01096 |
| S | — | protein | 188 | — | P13621 |
| b | — | protein | 136 | — | P13619 |
| d | — | protein | 156 | — | P13620 |
| h | — | protein | 62 | — | P02721 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 3 copies · chains A, D, B, E, C, F
- ADP · Adenosine-5'-diphosphate · ligand · 3 copies · chains C, D, E, B, F
- MG · Magnesium ion · metal · 5 copies · chains A, B, C, D, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YY0 · bovine ATP synthase F1-peripheral stalk domain, state 1 · the same entry in another collection · chain S against S, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19483
- Every structure of UniProt P00829
- Every structure of UniProt P05631
- Every structure of UniProt P05630
- Every structure of UniProt P05632
- Every structure of UniProt P01096
- Every structure of UniProt P13621
- Every structure of UniProt P13619
- Every structure of UniProt P13620
- Every structure of UniProt P02721
- Elsewhere: RCSB PDB 6YY0 · PDBe 6YY0 · UniProt P19483 · UniProt P00829 · UniProt P05631 · UniProt P05630 · UniProt P05632 · UniProt P01096 · UniProt P13621 · UniProt P13619 · UniProt P13620 · UniProt P02721
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.